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Remove hardcoded /home/gg paths so the project is portable

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Notebooks now use Path.home() / "cupido" for the repo root (works for
any user inside the JupyterLab container), and the offline-tracking
scripts read the ethoscope source-tree location from the new
ETHOSCOPE_SRC config constant — defaulting to ~/Code/ethoscope_project/...
and overridable via the ETHOSCOPE_SRC environment variable.

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
This commit is contained in:
Giorgio Gilestro 2026-05-01 08:55:44 +01:00
parent 5934dce21e
commit 231c7a437f
8 changed files with 25 additions and 14 deletions
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4
scripts/track_videos.py
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@ -27,11 +27,11 @@ from pathlib import Path
import numpy as np
from config import ETHOSCOPE_SRC, TARGETS_DIR, TRACKING_OUTPUT_DIR
# Import ethoscope from the local source tree (no pip install).
ETHOSCOPE_SRC = Path("/home/gg/Code/ethoscope_project/ethoscope/src/ethoscope")
sys.path.insert(0, str(ETHOSCOPE_SRC))
from config import TARGETS_DIR, TRACKING_OUTPUT_DIR # noqa: E402
from tracking_geometry import HD_FG_DATA, compute_roi_polygons # noqa: E402