Giorgio Gilestro
ab3dc10587
- paper/pnas -> paper/manuscript (venue-neutral)
- configs/layer1 -> configs/inheritance, src/knowledge -> src/inheritance
(imported as `inheritance`), make layer1 -> make inheritance; layer2 alias dropped
- inheritance and trained-network bundles named after the manuscript figure
they feed (fig2_grounding_sweep, figS3_rebaselining, ...), or descriptively
where they feed none; configs keep their `experiment:` value so parquet
hashes are unchanged, only output.dir moves
- figure scripts, SI figure sources, notebooks, REPRODUCING.md, README and the
SI Methods/tables updated; make clean no longer deletes tracked manifests;
reproduce.sh hashes the s{seed}/ layouts too
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Y64o8FKP7rCuXzC48pxpMm
33 lines
473 B
YAML
33 lines
473 B
YAML
experiment: E14
|
|
seed: 20260709
|
|
n_replicates: 20
|
|
source_config:
|
|
experiment: E14
|
|
kind: mating_system
|
|
seed: 20260709
|
|
n_replicates: 20
|
|
mating:
|
|
L: 12
|
|
N: 48
|
|
breadth: 1.0
|
|
K: 0
|
|
recomb_rate: 0.5
|
|
mu: 0.003
|
|
generations: 60
|
|
sweep:
|
|
- param: mating.K
|
|
values:
|
|
- 0
|
|
- 3
|
|
- 6
|
|
- 10
|
|
- param: mating.breadth
|
|
values:
|
|
- 0.03
|
|
- 0.08
|
|
- 0.17
|
|
- 0.35
|
|
- 0.6
|
|
- 1.0
|
|
output:
|
|
dir: results/figS13_mating_breadth
|