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b417a66c23 Fig. 1B: the conceptual cartoon — from a society in space to a society in time
The paper's key move drawn as a two-panel partner to the programme grid (now
Fig. 1A): on the left, the usual picture — contemporaries exchanging messages
(multi-agent systems, one moment on the clock); on the right, the same
ecosystem seen along its time axis — a pedigree in which a rare capability
(gold dot) is lost under single-parent inheritance, reassembled by merging
complementary parents, and re-supplied by grounding from a reality that can
say no (the globe). Friendly-robot glyphs, colour-coded capability dots;
build.py now stacks multiple PDFs per figure; the Introduction cites 1A and
1B in panel order.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-07 12:50:36 +01:00
0159e2839a New Fig. 1 (experimental-programme schematic); Table 2 to SI; figures in citation order; Fig. 2B legible labels
Replaces the results table with a pipeline figure: five questions x three
architecture tiers (exact Wright-Fisher simulator, trained networks, language
models), filled cells naming the experiments, dashed cells the honest gaps.
Table 1 (the dictionary) stays; Table 2 moves to SI Appendix Table S2. The
renumber surfaced a pre-existing citation-order violation (the LLM figure was
cited in the recombination section before Figs. 3-6), so figures are renumbered
to strict first-citation order (LLM tier is now Fig. 3). Fig. 2B: the montage's
baked-in raster labels are cropped away and replaced with vector row numbers
under a rotated "generation" header.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-07 11:12:33 +01:00
96902e87f0 figures: publication-ready — unified, lettered, codename-free
paper/pnas/make_figs.py re-plots every panel directly from the committed
results artifacts into six single-file figures (figs/fig1..fig6.pdf):
no experiment codenames or suptitles (interpretation moved to captions),
bold panel letters, plain-language axis labels and legend entries, one
consistent style (8pt, no top/right spines). Panels: fig1 A-B (grounding
equilibrium + MNIST montage with its baked-in title cropped), fig2 A-B
(blending cancellation + Fisher-Muller), fig3 A-D (outbreeding, directed
recombination, mating breadth champion + diversity), fig4 A-C (society
ablation trajectories), fig5 A-F (speciation: analytic curve + cliff,
MLP decomposition + conflict sweep, LLM coherence + duration null),
fig6 A-D (seed-replicated merging, 7B-hard routing vs averaging,
predictive-test scatter, predictor comparison). build.py now places the
single PDFs; captions rewritten per lettered panel; in-text panel refs
updated (5B->5C-D, 5C->5E-F); stale stacked copies removed. Document
20pp -> 18pp.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-07 09:09:46 +01:00