MachineSex/paper
Giorgio Gilestro bf4b1c077c Phase 4: PNAS research-article draft (main.md + composed figures + SI skeleton)
paper/pnas/main.md — the manuscript restructured as a research article
(~5.6k words main text): significance statement, abstract, introduction
(diagnosis conceded; the management thesis; the interpretation/
explanation/prediction ladder with the prediction rung stated as a
bounded controlled test), the minimal model with its exactness boundary
(learning kernel cited against ourselves), Table 1 dictionary with
per-row support levels, a five-step results ladder (grounding floor;
conservation law + operator boundaries + Fisher-Muller + directed sex +
mating structure; the jointly-necessary society; speciation across three
tiers with the emergent null; the controlled predictive test at
second-review calibration), discussion (design rules, borrowed-vs-ours
ledger, limits with the reviewer's generalisation-before-scale ordering,
what biology gets back), brief methods, 30 references.

build.py composes 6 figures by stacking committed vector PDFs (bespoke
unified re-plots deferred to submission polish); builds clean under
tectonic (15 pp incl. 6 full-page figures). si.md: SI skeleton
(propositions, claims ledger, per-tier methods, statistics, figure
list). Manifesto sections of v6 (institutions, timescales, re-minting)
compressed into Discussion per the plan; v6 remains the long-form
perspective document.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-06 18:24:58 +01:00
..
arxiv paper: claim-narrowing revision from the external review 2026-09-06 15:14:28 +01:00
pnas Phase 4: PNAS research-article draft (main.md + composed figures + SI skeleton) 2026-09-06 18:24:58 +01:00
blueprint.md Layer 1 core: Wright-Fisher knowledge-transmission model with E1-E2 2026-07-04 18:10:18 +02:00
response-to-review-2.md second review round: tempered claims, robust statistics, corrected technical statements 2026-09-06 17:55:46 +01:00
response-to-review.md paper: response to the external review + the last outstanding fix 2026-09-06 17:31:36 +01:00
results-summary.md papers: consolidate the real-LLM recombination arc (merge/moe/directed + headroom law) 2026-07-05 19:20:19 +01:00
si-notes.md second review round: tempered claims, robust statistics, corrected technical statements 2026-09-06 17:55:46 +01:00
the-evolution-of-sex-for-ai-accessible.md paper: claim-narrowing revision from the external review 2026-09-06 15:14:28 +01:00
the-evolution-of-sex-for-ai.md second review round: tempered claims, robust statistics, corrected technical statements 2026-09-06 17:55:46 +01:00
the-lamarckian-society-v5.md papers: consolidate the real-LLM recombination arc (merge/moe/directed + headroom law) 2026-07-05 19:20:19 +01:00