Removed from main (all preserved on the dev branch): the arXiv build and
its sources, design documents (blueprint, results summary, review responses,
essay drafts), tasks/ and CLAUDE.md, the cover letter and reference tooling,
two unused manuscript figures, and every experiment that feeds no figure or
number in the paper: the collapse null, the sexual-vs-asexual lineage, the
NK speciation variant, the 0.5B single-seed LLM prototypes, the compose and
society experiments with their calibration and pilot runs, and their
configs, runners, tests, figure scripts and PBS jobs. Their result bundles
are moved to results/_archive/ (ignored) so the parquets stay on disk.
Also: plot_llm_speciation reads the s{seed}/ layout; the mating-breadth
plot writes under its bundle name; Makefile targets reduced to the kept
experiments; REPRODUCING.md and README point to dev for the rest.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Y64o8FKP7rCuXzC48pxpMm
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| .. | ||
| llm_smol.pdf | ||
| llm_smol.png | ||
| manifest.json | ||
| README.md | ||
| resolved_config.yaml | ||
llm_merge_seeds_smol — the Fisher–Muller replication on a second base lineage (SmolLM2-1.7B-Instruct)
Claim tested (manuscript revision 2026-09-12). Every language-model result in the paper used one
model lineage (Qwen2.5). Does "merged specialists exceed every parent" hold on an unrelated base?
Base: HuggingFaceTB/SmolLM2-1.7B-Instruct (Apache-2.0, Llama architecture, different lab and
pretraining corpus). Identical protocol to llm_merge_seeds (three disjoint families, 600 training
tasks, 3 epochs, rank-16 LoRA, fixed 100-task test sets, soup and TIES merges, 5 training seeds);
adapters_dir: models/llm_smol keeps the specialist cache apart from Qwen's. Ran on one L40S in
12 min (hpc/llm_smol.pbs). Numbers from figures/stats_llm_smol.py; figure llm_smol.png (both
lineages side by side).
Result — replicates, 5/5 seeds, with the same magnitudes
| contrast (SmolLM2) | overall | worst family |
|---|---|---|
| soup − best specialist | +0.049 ± 0.022 (5/5 seeds) | +0.190 ± 0.045 (5/5) |
| TIES − best specialist | +0.097 ± 0.020 (5/5) | +0.202 ± 0.077 (5/5) |
| (Qwen2.5-0.5B, for reference) soup − best | +0.040 ± 0.035 (4/5) | +0.200 ± 0.020 (5/5) |
| (Qwen) TIES − best | +0.055 ± 0.020 (5/5) | +0.204 ± 0.016 (5/5) |
Absolute levels: best specialist 0.610 ± 0.013 overall / 0.128 worst-family; soup 0.659 / 0.318; TIES 0.707 / 0.330. Falsifier (not triggered): merged ≤ best specialist in a majority of seeds.