- paper/pnas -> paper/manuscript (venue-neutral)
- configs/layer1 -> configs/inheritance, src/knowledge -> src/inheritance
(imported as `inheritance`), make layer1 -> make inheritance; layer2 alias dropped
- inheritance and trained-network bundles named after the manuscript figure
they feed (fig2_grounding_sweep, figS3_rebaselining, ...), or descriptively
where they feed none; configs keep their `experiment:` value so parquet
hashes are unchanged, only output.dir moves
- figure scripts, SI figure sources, notebooks, REPRODUCING.md, README and the
SI Methods/tables updated; make clean no longer deletes tracked manifests;
reproduce.sh hashes the s{seed}/ layouts too
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Y64o8FKP7rCuXzC48pxpMm
46 lines
1.8 KiB
YAML
46 lines
1.8 KiB
YAML
experiment: E6_remint_gate
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seed: 20260704
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n_replicates: 100
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generations: 400
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# Re-minting gate / irreversibility (blueprint 2.5-E6). Re-minting freezes the current
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# distribution as the new grounding reference and DISCARDS the original truth. Compare
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# re-minting a healthy (high-H) vs a collapsed (low-H) lineage, and the protective effect
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# of gating re-mint on diversity. Metric: forward KL to the ORIGINAL truth. A collapsed
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# re-mint locks KL high forever (original tails unrecoverable); a gated lineage refuses to
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# re-mint while collapsed, so the original truth is retained and KL is not locked.
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truth:
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K: 500
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R: 1
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tail: zipf
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zipf_s: 1.1
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tail_frac: 0.5
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tail_threshold: 1.0e-3
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init: truth
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dynamics:
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n: 200
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teachers: {K_T: 1, rho: 0.0, q: 1.0}
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grounding: {m: 3, policy: proportional}
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selection: {mode: none, novelty_alpha: 0.0}
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remint: {enabled: false, period: 150, H_gate: null}
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metrics:
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kl_floor: 1.0e-9
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support_eps: 1.0e-9
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# Arms vary grounding strength (healthy vs collapsing) and remint policy together.
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sweep:
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- param: arm
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values:
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- name: healthy_remint # strong grounding -> H stays high; re-mint is harmless
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set: {dynamics.grounding.m: 60, dynamics.remint.enabled: true, dynamics.remint.H_gate: null}
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- name: collapsed_remint # weak grounding -> collapses; ungated re-mint locks it in
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set: {dynamics.grounding.m: 1, dynamics.remint.enabled: true, dynamics.remint.H_gate: null}
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- name: collapsed_gated # weak grounding; gate (0.75) blocks re-mint while H is low
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set: {dynamics.grounding.m: 1, dynamics.remint.enabled: true, dynamics.remint.H_gate: 0.75}
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- name: collapsed_noremint # weak grounding baseline; original truth always retained
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set: {dynamics.grounding.m: 1, dynamics.remint.enabled: false}
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output:
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dir: results/figS3_rebaselining
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