Code and data associated with "The evolution of sex for artificial intelligence - A population-genetic framework for multigenerational model populations". Gilestro, 2026
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Giorgio Gilestro 6bca1db61e paper: reframe the perspective paper around sexual reproduction (v4 -> v5)
Rewrite the-lamarckian-society-v4.md -> v5, making sexual reproduction the
central engine and lifting accessibility for a cross-disciplinary audience
(geneticists, ML engineers, neuroscientists) — every field's jargon glossed
inline, big picture kept legible, measured tone, honest about scope (the
evidence is from minimal models, not LLMs).

Core reframe (section 5): single-teacher distillation is asexual copying,
which collapses (Muller's ratchet = model collapse); the cure is to ground
every birth in reality and to reproduce SEXUALLY — recombining many
complementary parents so offspring can exceed any parent (Fisher-Muller).
Adds the honest limits (outbreeding depression on entangled skills) and the
distinctly-AI advantage (directed sex: choose mates, screen offspring,
unbounded parents). Turns the old "a companion paper will..." into "what we
built and found," folding in the demonstrated results (E1-E11, neural +
MNIST, the learning kernel) and the Riis positioning (concede collapse=drift
as prior art; claim the control-theory cure). Update CLAUDE.md / README
references; results-summary noted alongside.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-05 13:53:10 +01:00
configs society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
figures society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
paper paper: reframe the perspective paper around sexual reproduction (v4 -> v5) 2026-07-05 13:53:10 +01:00
results society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
src society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
tasks society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
tests society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
.gitignore neural: real-MNIST external-validity tier (collapse + grounding) 2026-07-05 09:19:36 +01:00
CLAUDE.md paper: reframe the perspective paper around sexual reproduction (v4 -> v5) 2026-07-05 13:53:10 +01:00
Makefile society: the dynamic Lamarckian society — the vertical claim (E11 / C3) 2026-07-05 12:34:01 +01:00
pyproject.toml Layer 1.5: architecture-general neural existence proof 2026-07-04 21:02:49 +01:00
README.md paper: reframe the perspective paper around sexual reproduction (v4 -> v5) 2026-07-05 13:53:10 +01:00
uv.lock Layer 1.5: architecture-general neural existence proof 2026-07-04 21:02:49 +01:00

The Lamarckian Society — Layer 1 (analytical core)

A parametric population-genetics model of knowledge transmission across generations of learning agents. Knowledge transmission is modelled literally as a WrightFisher process (not by analogy): a model's knowledge is a distribution p_t over K discrete items; a fixed true distribution p* has a rare tail; each generational step is "sample from the parent (drift) + mix in fresh real samples (grounding/immigration) + refit." Model collapse is the loss of rare alleles under drift.

See paper/blueprint.md (the normative build spec), paper/the-lamarckian-society-v5.md (the perspective paper), and paper/results-summary.md (a summary of all results).

Reproduce

Environment is a uv venv built from the committed, hash-pinned uv.lock — that lockfile is the single source of truth for "it runs" (Layer 1 is pure NumPy/SciPy and bitwise-reproducible from a seed; no container needed).

# one-time: install uv (https://astral.sh/uv)
curl -LsSf https://astral.sh/uv/install.sh | sh

uv sync                 # build .venv from uv.lock
make test               # correctness + scientific-validation tests (the spine of trust)
make layer1             # run experiments E1E6
make figures            # regenerate figures from committed results

Layout

src/knowledge/   Layer 1 package (imported as `knowledge`)
configs/layer1/  one YAML per experiment (E1..E6)
figures/         plot_EX.py — read results.parquet only
tests/           test_correctness.py + test_scientific_validation.py (analytic checks)
paper/           blueprint.md, perspective paper, figure_manifest.md
results/         written artifacts (gitignored; hashes tracked in manifest.json)