MachineSex/paper/pnas
Giorgio Gilestro 073fc33509 Accessibility pass: introduce every pop-gen term at first use, with real-world anchors
The CS reader is now walked into the biology as it arrives: drift (surname
extinction, island alleles), Wright-Fisher and heterozygosity defined in
place (collision-probability reading), Muller's ratchet (Y-chromosome decay),
immigration (the one-migrant-per-generation rule of conservation management),
blending inheritance (Jenkin's 1867 swamping argument, which the Proposition
makes exact), Fisher-Muller (clonal competition vs assembly), genotype/locus,
epistasis and NK landscapes glossed, outbreeding depression (the Tatra ibex
restocking collapse), panmixia, BDM incompatibilities (mule sterility),
hybrid load. Three new literature anchors (Mills & Allendorf 1996; Jenkin
1867; Templeton 1986), all verified; references renumbered to
first-appearance order (now 72) and re-verified 1..72.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-07 10:58:46 +01:00
..
figs figures: publication-ready — unified, lettered, codename-free 2026-09-07 09:09:46 +01:00
body.tex Accessibility pass: introduce every pop-gen term at first use, with real-world anchors 2026-09-07 10:58:46 +01:00
build.py figures: publication-ready — unified, lettered, codename-free 2026-09-07 09:09:46 +01:00
main.md Accessibility pass: introduce every pop-gen term at first use, with real-world anchors 2026-09-07 10:58:46 +01:00
main.pdf Accessibility pass: introduce every pop-gen term at first use, with real-world anchors 2026-09-07 10:58:46 +01:00
main.tex Phase 4: PNAS research-article draft (main.md + composed figures + SI skeleton) 2026-09-06 18:24:58 +01:00
make_figs.py figures: publication-ready — unified, lettered, codename-free 2026-09-07 09:09:46 +01:00
si.md Phase 4: PNAS research-article draft (main.md + composed figures + SI skeleton) 2026-09-06 18:24:58 +01:00