MachineSex/configs/llm/speciation.yaml
Giorgio Gilestro a40ace1821 second review round: tempered claims, robust statistics, corrected technical statements
Analyses (figures/stats_llm_epistasis.py, committed + reproducible):
condition-clustered bootstrap CIs (functional measures exclude zero:
dis_raw [+0.04,+0.69], conf-weighted [+0.02,+0.68]; gradient alignment
[-0.59,-0.06]; geometry straddles zero), PAIRED predictor contrasts (not
individually significant — stated), leave-one-condition-out held-out
prediction (functional replicates, geometry ~0, performance baseline
unstable), three outcome references (ordering sensitive to reference —
reported, with the mechanism), between/within-axis decomposition
(within-conflict identification impossible by design; the compat axis
identifies), and seed-level paired reliability (routing/directed beat
soup 3/3 seeds incl. one catastrophic soup failure; CI-width fragility
claim withdrawn).

Renames and corrections: "decisive experiment" -> "controlled predictive
test"; "operational epistasis" -> "confidence-weighted functional
conflict (proposed proxy)"; "functional by construction" -> "controls a
major source of coordinate mismatch / conflict-associated" (module,
configs, READMEs, figures); SI proposition's "chord" defined precisely
(endpoint-loss interpolation, invariant) vs the path (not invariant) +
no-global-optimality caveat (removable = lower bound, residual = upper);
snowball count != performance cliff distinction added; claims table
gains four rows (grid finding / weighting NOT supported / functional-vs-
all-geometry not established / operator choice open); §1 ladder states
the prediction rung as a bounded small-model result.

paper/response-to-review-2.md: point-by-point, opening with the
bookkeeping correction (E13b/c were in the reviewed draft — revised
interpretation, not new results). READMEs rewritten around the four
analyses with the chronology (prospective/adaptive/post-hoc) disclosed.
151 tests green.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-06 17:55:46 +01:00

32 lines
1.7 KiB
YAML

experiment: llm_speciation
kind: llm_speciation
seed: 1
n_replicates: 1
# LLM-tier model speciation (E13 in language-model weights; PNAS work order Phase 3). Two LoRA
# children from the same frozen base — which controls a major source of coordinate mismatch (no
# alignment step needed), allowing a cleaner test of conflict-associated merge failure. Two sweeps:
# conflict_fracs — the IMPOSED cliff: each child has a private disjoint family (A: strings,
# B: arith) plus a shared set of AMBIGUOUS sort prompts ("Sort the list [...]", no direction)
# answered ascending by A and descending by B (each convention harmless alone, contradictory
# jointly — the BDM structure). Prediction: the MERGED model's private-family competence degrades
# and its convention coherence (max of asc/desc grading) collapses as conflict grows, while each
# PARENT stays fine — hybrid breakdown in verifier units, echoing the MLP cliff.
# durations — the EMERGENT null: pure disjoint specialists over-trained (epochs swept), zero shared
# data. Arbitrates the MLP tier's null (no emergent isolation; the merge rescued specialists at
# every divergence) against the empirical report that averaging prefers under-trained experts
# (arXiv:2607.11997). Pre-registered readings: merged quality falls with duration while parents'
# own-family quality holds -> emergent incompatibility at the LLM tier; otherwise the null
# generalises. Either outcome is reportable; do not tune toward one.
base_model: Qwen/Qwen2.5-0.5B-Instruct
family_a: strings
family_b: arith
n_train: 400
n_test: 100
epochs: 3
lora: {r: 16, alpha: 32}
conflict_fracs: [0.0, 0.25, 0.5, 0.75, 1.0]
durations: [1, 3, 6, 12]
output: {dir: results/llm_speciation}