Phase 4: PNAS research-article draft (main.md + composed figures + SI skeleton)

paper/pnas/main.md — the manuscript restructured as a research article (~5.6k words main text): significance statement, abstract, introduction (diagnosis conceded; the management thesis; the interpretation/ explanation/prediction ladder with the prediction rung stated as a bounded controlled test), the minimal model with its exactness boundary (learning kernel cited against ourselves), Table 1 dictionary with per-row support levels, a five-step results ladder (grounding floor; conservation law + operator boundaries + Fisher-Muller + directed sex + mating structure; the jointly-necessary society; speciation across three tiers with the emergent null; the controlled predictive test at second-review calibration), discussion (design rules, borrowed-vs-ours ledger, limits with the reviewer's generalisation-before-scale ordering, what biology gets back), brief methods, 30 references. build.py composes 6 figures by stacking committed vector PDFs (bespoke unified re-plots deferred to submission polish); builds clean under tectonic (15 pp incl. 6 full-page figures). si.md: SI skeleton (propositions, claims ledger, per-tier methods, statistics, figure list). Manifesto sections of v6 (institutions, timescales, re-minting) compressed into Discussion per the plan; v6 remains the long-form perspective document. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-06 18:24:58 +01:00 · 2026-09-06 18:24:58 +01:00 · bf4b1c077c
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