New Fig. 1 (experimental-programme schematic); Table 2 to SI; figures in citation order; Fig. 2B legible labels

Replaces the results table with a pipeline figure: five questions x three architecture tiers (exact Wright-Fisher simulator, trained networks, language models), filled cells naming the experiments, dashed cells the honest gaps. Table 1 (the dictionary) stays; Table 2 moves to SI Appendix Table S2. The renumber surfaced a pre-existing citation-order violation (the LLM figure was cited in the recombination section before Figs. 3-6), so figures are renumbered to strict first-citation order (LLM tier is now Fig. 3). Fig. 2B: the montage's baked-in raster labels are cropped away and replaced with vector row numbers under a rotated "generation" header. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01BkRLcc18rwT2Lysu6PbG7v
2026-09-07 11:12:33 +01:00 · 2026-09-07 11:12:33 +01:00 · 0159e2839a
commit 0159e2839a
parent 073fc33509
13 changed files with 208 additions and 109 deletions
--- a/paper/pnas/figs/fig1.pdf
+++ b/paper/pnas/figs/fig1.pdf
--- a/paper/pnas/figs/fig2.pdf
+++ b/paper/pnas/figs/fig2.pdf
--- a/paper/pnas/figs/fig3.pdf
+++ b/paper/pnas/figs/fig3.pdf
--- a/paper/pnas/figs/fig4.pdf
+++ b/paper/pnas/figs/fig4.pdf
--- a/paper/pnas/figs/fig5.pdf
+++ b/paper/pnas/figs/fig5.pdf
--- a/paper/pnas/figs/fig6.pdf
+++ b/paper/pnas/figs/fig6.pdf
--- a/paper/pnas/figs/fig7.pdf
+++ b/paper/pnas/figs/fig7.pdf